BLAST2.0 query receipt
Thanks. Your request has been filed with the following data:
Program: blastn
Database: embl-sp
Number: 17728
e-mail:
Format: plain_text
Sequence: AAAAGAAAAGGTTAGAAAGATGAGAGATGATAAAGGGTCCATTTGAGGTTAGGTAA TATGGTTTGGTATCCCTGTAGTTAAAAGTTTTTGTCTTATTTTAGAATACTGTGAT CTATTTCTTTAGTATTAATTTTTCCTTCTGTTTTCCTCATCTAGGGAACCCCAAGA GCATCCAATAGAAGCTGTGCAATTATGTAAAATTTTCAACTGTCTTCCTCAAAATA AAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTTCTCAGAAGCACAGA ATATTTTTATATTTCCTTTATGTGAATTTTTAAGCTGCAAATCTGATGGCCTTAAT TTCCTTTTTGACACTGAAAGTTTTGTAAAAGAAATCATGTCCATACACTTTGTTGC AAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGGGGTTC CTCAAATTTTTTGACTTTTTTTGTATGTGTGTTTTTTCTTTTTTTTTAAGTTCTTA TGAGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATTGCC CCATCTAGACTAGCAATCTCTTCATTATTCTCTGCTATATATAAAACGGTGCTGTG AGGGAGGGGAAAAGCATTTTTCAATATATTGAACTTTTGTACTGAATTTTTTTGTA ATAAGCAATCAAGGTTATAATTTTTTTTAAAATAGAAATTTTGTAAGAAGGCAATA TTAACCTAATCACCATGTAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTT ATGGTTACTTCTTCTCTTAGATTCTTAATTCATGAGGAGGGTGGGGGAGGGAGGTG GAGGGAGGGAAGGGTTTCTCTATTAAAATGCATTCGTTGTGTTTTTTAAGATAGTG TAACTTGCTTAAATTTCTTATGTGACATTAACAAATAAAAAAGCTCTTTTAATATTAGATAA
Processing, please wait...
blastall.remote -s sib-blast.unil.ch -p blastn -d embl-sp wwwtmp/sq.17728.txt -M blosum62 -K 0 -e 10.0 -F T -G def -E def -X def -v 50 -b 50 -g T |
Here are your search results:
SIB BLAST network server version 1.5 of July 5, 2002
compiled by GNU C version 2.95.1 19990816 (release)
compiled on Jul 5 2002.
Welcome to the SIB BLAST Network Service (isrec-insect6)
==============================================================================
Swiss Institute of Bioinformatics (SIB)
Ludwig Institute for Cancer Research (LICR)
Swiss Institute for Experimental Cancer Research (ISREC)
==============================================================================
If results of this search are reported or published, please mention that
the computation was performed at the SIB using the BLAST network service.
NUCLEOTIDE SEQUENCE DATABASES
embre * EMBL Data Library, Release 71, June 2002
embu * EmblUpdate 03-Jul-2002
embl * EMBL+EmblUpdate 03-Jul-2002
EST Database of Expressed Sequence Tags 03-Jul-2002
GSS Genome Survey Sequences 03-Jul-2002
STS Database of Sequence Tagged Sites 03-Jul-2002
nr * Non-redundant EMBL+EmblUpdate+GenBank 03-Jul-2002
repbase + Repbase, February 1996
simple Simple sequence repeats (J. Mol. Evol. 40:120, 1995)
yeast S.cerevisiae genome
worm C.elegans genome
* The est, gss, and sts divisions of EMBL are excluded from these databases.
+ Contains sequences from the files humrep.ref, invrep.ref, mamrep.ref,
plnrep.ref, rodrep.ref, and vertrep.ref from repbase.
============================================================================
The BLAST Network Service uses a server developed at SIB and the NCBI
BLAST 2 software.
For problems regarding this site, please contact one of the following persons:
- problems with the programs: Christian Iseli (chris@cmpteam4.unil.ch)
- problems with the databases: Victor Jongeneel (Victor.Jongeneel@isb-sib.ch)
============================================================================
BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= unknown
(958 letters)
Database: fun-re; fun-up; hum-re; hum-up; inv-re; inv-up; mam-re;
mam-up; mus-re; mus-up; org-re; org-up; pat-re; phg-re; phg-up;
pln-re; pln-up; pro-re; pro-up; rod-re; rod-up; syn-re; syn-up;
unc-re; unc-up; vrl-re; vrl-up; vrt-re; vrt-up
1,800,327 sequences; 6,293,817,000 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|AX336753|AX336753 [Homo sapiens]Sequence 7262 from Patent WO... 900 0.0
emb|L37747|HSLAM11 [Homo sapiens]Homo sapiens lamin B1 gene, exo... 900 0.0
emb|AC093532|AC093532 [Homo sapiens]Homo sapiens chromosome 5 cl... 862 0.0
emb|AC093284|AC093284 [Homo sapiens]Homo sapiens chromosome 5 cl... 862 0.0
emb|AX330946|AX330946 [Homo sapiens]Sequence 1455 from Patent WO... 595 e-167
emb|M34458|HSLAMBA [Homo sapiens]Human lamin B mRNA, complete cds. 595 e-167
emb|BC012295|BC012295 [Homo sapiens]Homo sapiens, Similar to lam... 587 e-164
emb|AX281804|AX281804 [Homo sapiens]Sequence 213 from Patent WO0... 571 e-160
emb|AK056553|AK056553 [Homo sapiens]Homo sapiens cDNA FLJ31991 f... 571 e-160
emb|AX366367|AX366367 [Homo sapiens]Sequence 134 from Patent WO0... 531 e-148
emb|AX261176|AX261176 [Homo sapiens]Sequence 827 from Patent WO0... 337 1e-89
emb|AX261631|AX261631 [Homo sapiens]Sequence 1282 from Patent WO... 258 1e-65
emb|D50080|MMLAMIN11 [Mus musculus]Mouse DNA for lamin B1, exon ... 256 4e-65
emb|X16705|MMLAMINB [Mus musculus]Mouse mRNA for lamin B 242 7e-61
emb|M35153|MMLAMB [Mus musculus]Mus musculus lamin B mRNA, compl... 242 7e-61
emb|U72353|RNU72353 [Rattus norvegicus]Rattus norvegicus lamin B... 68 2e-08
emb|AE003631|AE003631 [Drosophila melanogaster]Drosophila melano... 46 0.078
emb|AC092226|AC092226 [Drosophila melanogaster]Drosophila melano... 46 0.078
emb|AC005117|AC005117 [Drosophila melanogaster]Drosophila melano... 46 0.078
emb|AE003721|AE003721 [Drosophila melanogaster]Drosophila melano... 44 0.31
emb|AC009462|AC009462 [Drosophila melanogaster]Drosophila melano... 44 0.31
emb|AC009394|AC009394 [Drosophila melanogaster]Drosophila melano... 44 0.31
emb|AL035444|HS43H13 [Homo sapiens]Human DNA sequence from clone... 44 0.31
emb|AL512640|AL512640 [Homo sapiens]Human DNA sequence from clon... 44 0.31
emb|AP003193|AP003193 [Clostridium perfringens]Clostridium perfr... 42 1.2
emb|X64726|PSGDCHAA [Pisum sativum]P.sativum gdcH gene for H-pro... 42 1.2
emb|J05164|PSGDC [Pisum sativum]Pea (P.sativum) H-protein of gly... 42 1.2
emb|AY064061|AY064061 [Arabidopsis thaliana]Arabidopsis thaliana... 42 1.2
emb|AY056208|AY056208 [Arabidopsis thaliana]Arabidopsis thaliana... 42 1.2
emb|AC025782|AC025782 [Arabidopsis thaliana]Arabidopsis thaliana... 42 1.2
emb|X53656|PSHPMIT [Pisum sativum]P.sativum mRNA for H-protein o... 42 1.2
emb|AL670220|AL670220 [Mus musculus]Mouse DNA sequence from clon... 42 1.2
emb|AD000671|HSAD671 [Homo sapiens]Homo sapiens DNA from chromos... 42 1.2
emb|AC002314|HSAC2314 [Homo sapiens]Human DNA from chromosome 19... 42 1.2
emb|AC103890|AC103890 [Homo sapiens]16q24.3 clone, complete sequ... 42 1.2
emb|AC025237|AC025237 [Homo sapiens]Homo sapiens BAC clone RP11-... 42 1.2
emb|Z12296|EFSPREG [Enterococcus faecalis]E.faecalis sprE gene f... 40 4.8
emb|AP003186|AP003186 [Clostridium perfringens]Clostridium perfr... 40 4.8
emb|AE007616|AE007616 [Clostridium acetobutylicum]Clostridium ac... 40 4.8
emb|AL023094|ATT4L20 [Arabidopsis thaliana]Arabidopsis thaliana ... 40 4.8
emb|AL161585|ATCHRIV81 [Arabidopsis thaliana]Arabidopsis thalian... 40 4.8
emb|AF069165|AF069165 [Aphidius smithi]Aphidius smithi NADH dehy... 40 4.8
emb|AF069162|AF069162 [Aphidius nigripes]Aphidius nigripes NADH ... 40 4.8
emb|AF393442|AF393442 [Sacculina carcini]Sacculina carcini ultra... 40 4.8
emb|Z75551|CET28H10 [Caenorhabditis elegans]Caenorhabditis elega... 40 4.8
emb|AF110404|AF110404 [Bactrocera tryoni]Bactrocera tryoni Homer... 40 4.8
emb|AC084674|AC084674 [Caenorhabditis briggsae]Caenorhabditis br... 40 4.8
emb|AP000926|AP000926 [Homo sapiens]Homo sapiens genomic DNA, ch... 40 4.8
emb|AC100832|AC100832 [Homo sapiens]Homo sapiens chromosome 17, ... 40 4.8
emb|AC110614|AC110614 [Homo sapiens]Homo sapiens BAC clone RP11-... 40 4.8
>emb|AX336753|AX336753 [Homo sapiens]Sequence 7262 from Patent
WO0194629.
Length = 958
Score = 900 bits (454), Expect = 0.0
Identities = 454/454 (100%)
Strand = Plus / Plus
Query: 1 aaaagaaaaggttagaaagatgagagatgataaagggtccatttgaggttaggtaatatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaagaaaaggttagaaagatgagagatgataaagggtccatttgaggttaggtaatatg 60
Query: 61 gtttggtatccctgtagttaaaagtttttgtcttattttagaatactgtgatctatttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtttggtatccctgtagttaaaagtttttgtcttattttagaatactgtgatctatttct 120
Query: 121 ttagtattaatttttccttctgttttcctcatctagggaaccccaagagcatccaataga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttagtattaatttttccttctgttttcctcatctagggaaccccaagagcatccaataga 180
Query: 181 agctgtgcaattatgtaaaattttcaactgtcttcctcaaaataaagaagtatggtaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agctgtgcaattatgtaaaattttcaactgtcttcctcaaaataaagaagtatggtaatc 240
Query: 241 tttacctgtatacagtgcagagccttctcagaagcacagaatatttttatatttccttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttacctgtatacagtgcagagccttctcagaagcacagaatatttttatatttccttta 300
Query: 301 tgtgaatttttaagctgcaaatctgatggccttaatttcctttttgacactgaaagtttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtgaatttttaagctgcaaatctgatggccttaatttcctttttgacactgaaagtttt 360
Query: 361 gtaaaagaaatcatgtccatacactttgttgcaagatgtgaattattgacactgaactta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtaaaagaaatcatgtccatacactttgttgcaagatgtgaattattgacactgaactta 420
Query: 421 ataactgtgtactgttcggaaggggttcctcaaa 454
||||||||||||||||||||||||||||||||||
Sbjct: 421 ataactgtgtactgttcggaaggggttcctcaaa 454
Score = 549 bits (277), Expect = e-153
Identities = 307/322 (95%)
Strand = Plus / Plus
Query: 496 aagttcttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaaga 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aagttcttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaaga 555
Query: 556 ttgccccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgt 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ttgccccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgt 615
Query: 616 gagggaggggaaaagcatttttcaatatattgaacttttgtactgaannnnnnngtaata 675
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 616 gagggaggggaaaagcatttttcaatatattgaacttttgtactgaatttttttgtaata 675
Query: 676 agcaatcaaggttataannnnnnnnaaaatagaaattttgtaagaaggcaatattaacct 735
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 676 agcaatcaaggttataattttttttaaaatagaaattttgtaagaaggcaatattaacct 735
Query: 736 aatcaccatgtaagcactctggatgatggattccacaaaacttggttttatggttacttc 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 aatcaccatgtaagcactctggatgatggattccacaaaacttggttttatggttacttc 795
Query: 796 ttctcttagattcttaattcat 817
||||||||||||||||||||||
Sbjct: 796 ttctcttagattcttaattcat 817
Score = 206 bits (104), Expect = 4e-50
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 855 tttctctattaaaatgcattcgttgtgttttttaagatagtgtaacttgcttaaatttct 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 tttctctattaaaatgcattcgttgtgttttttaagatagtgtaacttgcttaaatttct 914
Query: 915 tatgtgacattaacaaataaaaaagctcttttaatattagataa 958
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 tatgtgacattaacaaataaaaaagctcttttaatattagataa 958
>emb|L37747|HSLAM11 [Homo sapiens]Homo sapiens lamin B1 gene, exon
11, complete cds.
Length = 958
Score = 900 bits (454), Expect = 0.0
Identities = 454/454 (100%)
Strand = Plus / Plus
Query: 1 aaaagaaaaggttagaaagatgagagatgataaagggtccatttgaggttaggtaatatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaagaaaaggttagaaagatgagagatgataaagggtccatttgaggttaggtaatatg 60
Query: 61 gtttggtatccctgtagttaaaagtttttgtcttattttagaatactgtgatctatttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtttggtatccctgtagttaaaagtttttgtcttattttagaatactgtgatctatttct 120
Query: 121 ttagtattaatttttccttctgttttcctcatctagggaaccccaagagcatccaataga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttagtattaatttttccttctgttttcctcatctagggaaccccaagagcatccaataga 180
Query: 181 agctgtgcaattatgtaaaattttcaactgtcttcctcaaaataaagaagtatggtaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agctgtgcaattatgtaaaattttcaactgtcttcctcaaaataaagaagtatggtaatc 240
Query: 241 tttacctgtatacagtgcagagccttctcagaagcacagaatatttttatatttccttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttacctgtatacagtgcagagccttctcagaagcacagaatatttttatatttccttta 300
Query: 301 tgtgaatttttaagctgcaaatctgatggccttaatttcctttttgacactgaaagtttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtgaatttttaagctgcaaatctgatggccttaatttcctttttgacactgaaagtttt 360
Query: 361 gtaaaagaaatcatgtccatacactttgttgcaagatgtgaattattgacactgaactta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtaaaagaaatcatgtccatacactttgttgcaagatgtgaattattgacactgaactta 420
Query: 421 ataactgtgtactgttcggaaggggttcctcaaa 454
||||||||||||||||||||||||||||||||||
Sbjct: 421 ataactgtgtactgttcggaaggggttcctcaaa 454
Score = 549 bits (277), Expect = e-153
Identities = 307/322 (95%)
Strand = Plus / Plus
Query: 496 aagttcttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaaga 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aagttcttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaaga 555
Query: 556 ttgccccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgt 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ttgccccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgt 615
Query: 616 gagggaggggaaaagcatttttcaatatattgaacttttgtactgaannnnnnngtaata 675
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 616 gagggaggggaaaagcatttttcaatatattgaacttttgtactgaatttttttgtaata 675
Query: 676 agcaatcaaggttataannnnnnnnaaaatagaaattttgtaagaaggcaatattaacct 735
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 676 agcaatcaaggttataattttttttaaaatagaaattttgtaagaaggcaatattaacct 735
Query: 736 aatcaccatgtaagcactctggatgatggattccacaaaacttggttttatggttacttc 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 aatcaccatgtaagcactctggatgatggattccacaaaacttggttttatggttacttc 795
Query: 796 ttctcttagattcttaattcat 817
||||||||||||||||||||||
Sbjct: 796 ttctcttagattcttaattcat 817
Score = 206 bits (104), Expect = 4e-50
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 855 tttctctattaaaatgcattcgttgtgttttttaagatagtgtaacttgcttaaatttct 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 tttctctattaaaatgcattcgttgtgttttttaagatagtgtaacttgcttaaatttct 914
Query: 915 tatgtgacattaacaaataaaaaagctcttttaatattagataa 958
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 tatgtgacattaacaaataaaaaagctcttttaatattagataa 958
>emb|AC093532|AC093532 [Homo sapiens]Homo sapiens chromosome 5 clone
RP11-407N4, complete sequence.
Length = 182564
Score = 862 bits (435), Expect = 0.0
Identities = 452/455 (99%), Gaps = 2/455 (0%)
Strand = Plus / Plus
Query: 1 aaaagaaaaggttagaaa-gatgagagatgataaagggtccatttgaggttaggtaatat 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 45374 aaaagaaaaggttagaaaagatgagagatgataaagggtccatttgaggttaggtaatat 45433
Query: 60 ggtttggtatccctgtagttaaaagtttttgtcttattttagaatactgtgatctatttc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45434 ggtttggtatccctgtagttaaaagtttttgtcttattttagaatactgtgatctatttc 45493
Query: 120 tttagtattaatttttccttctgttttcctcatctagggaaccccaagagcatccaatag 179
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 45494 tttagtattaatttttccttctgttttcctcatc-agggaaccccaagagcatccaatag 45552
Query: 180 aagctgtgcaattatgtaaaattttcaactgtcttcctcaaaataaagaagtatggtaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45553 aagctgtgcaattatgtaaaattttcaactgtcttcctcaaaataaagaagtatggtaat 45612
Query: 240 ctttacctgtatacagtgcagagccttctcagaagcacagaatatttttatatttccttt 299
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45613 ccttacctgtatacagtgcagagccttctcagaagcacagaatatttttatatttccttt 45672
Query: 300 atgtgaatttttaagctgcaaatctgatggccttaatttcctttttgacactgaaagttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45673 atgtgaatttttaagctgcaaatctgatggccttaatttcctttttgacactgaaagttt 45732
Query: 360 tgtaaaagaaatcatgtccatacactttgttgcaagatgtgaattattgacactgaactt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45733 tgtaaaagaaatcatgtccatacactttgttgcaagatgtgaattattgacactgaactt 45792
Query: 420 aataactgtgtactgttcggaaggggttcctcaaa 454
|||||||||||||||||||||||||||||||||||
Sbjct: 45793 aataactgtgtactgttcggaaggggttcctcaaa 45827
Score = 549 bits (277), Expect = e-153
Identities = 307/322 (95%)
Strand = Plus / Plus
Query: 496 aagttcttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaaga 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45869 aagttcttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaaga 45928
Query: 556 ttgccccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgt 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45929 ttgccccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgt 45988
Query: 616 gagggaggggaaaagcatttttcaatatattgaacttttgtactgaannnnnnngtaata 675
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 45989 gagggaggggaaaagcatttttcaatatattgaacttttgtactgaatttttttgtaata 46048
Query: 676 agcaatcaaggttataannnnnnnnaaaatagaaattttgtaagaaggcaatattaacct 735
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 46049 agcaatcaaggttataattttttttaaaatagaaattttgtaagaaggcaatattaacct 46108
Query: 736 aatcaccatgtaagcactctggatgatggattccacaaaacttggttttatggttacttc 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46109 aatcaccatgtaagcactctggatgatggattccacaaaacttggttttatggttacttc 46168
Query: 796 ttctcttagattcttaattcat 817
||||||||||||||||||||||
Sbjct: 46169 ttctcttagattcttaattcat 46190
Score = 194 bits (98), Expect = 1e-46
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 855 tttctctattaaaatgcattcgttgtgttttttaagatagtgtaacttgcttaaatttct 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46228 tttctctattaaaatgcattcgttgtgttttttaagatagtgtaacttgcttaaatttct 46287
Query: 915 tatgtgacattaacaaataaaaaagctcttttaatatt 952
||||||||||||||||||||||||||||||||||||||
Sbjct: 46288 tatgtgacattaacaaataaaaaagctcttttaatatt 46325
>emb|AC093284|AC093284 [Homo sapiens]Homo sapiens chromosome 5 clone
RP11-436A5, complete sequence.
Length = 91874
Score = 862 bits (435), Expect = 0.0
Identities = 452/455 (99%), Gaps = 2/455 (0%)
Strand = Plus / Minus
Query: 1 aaaagaaaaggttagaaa-gatgagagatgataaagggtccatttgaggttaggtaatat 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 10555 aaaagaaaaggttagaaaagatgagagatgataaagggtccatttgaggttaggtaatat 10496
Query: 60 ggtttggtatccctgtagttaaaagtttttgtcttattttagaatactgtgatctatttc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10495 ggtttggtatccctgtagttaaaagtttttgtcttattttagaatactgtgatctatttc 10436
Query: 120 tttagtattaatttttccttctgttttcctcatctagggaaccccaagagcatccaatag 179
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 10435 tttagtattaatttttccttctgttttcctcatc-agggaaccccaagagcatccaatag 10377
Query: 180 aagctgtgcaattatgtaaaattttcaactgtcttcctcaaaataaagaagtatggtaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10376 aagctgtgcaattatgtaaaattttcaactgtcttcctcaaaataaagaagtatggtaat 10317
Query: 240 ctttacctgtatacagtgcagagccttctcagaagcacagaatatttttatatttccttt 299
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10316 ccttacctgtatacagtgcagagccttctcagaagcacagaatatttttatatttccttt 10257
Query: 300 atgtgaatttttaagctgcaaatctgatggccttaatttcctttttgacactgaaagttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10256 atgtgaatttttaagctgcaaatctgatggccttaatttcctttttgacactgaaagttt 10197
Query: 360 tgtaaaagaaatcatgtccatacactttgttgcaagatgtgaattattgacactgaactt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10196 tgtaaaagaaatcatgtccatacactttgttgcaagatgtgaattattgacactgaactt 10137
Query: 420 aataactgtgtactgttcggaaggggttcctcaaa 454
|||||||||||||||||||||||||||||||||||
Sbjct: 10136 aataactgtgtactgttcggaaggggttcctcaaa 10102
Score = 549 bits (277), Expect = e-153
Identities = 307/322 (95%)
Strand = Plus / Minus
Query: 496 aagttcttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaaga 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10060 aagttcttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaaga 10001
Query: 556 ttgccccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgt 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10000 ttgccccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgt 9941
Query: 616 gagggaggggaaaagcatttttcaatatattgaacttttgtactgaannnnnnngtaata 675
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9940 gagggaggggaaaagcatttttcaatatattgaacttttgtactgaatttttttgtaata 9881
Query: 676 agcaatcaaggttataannnnnnnnaaaatagaaattttgtaagaaggcaatattaacct 735
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 9880 agcaatcaaggttataattttttttaaaatagaaattttgtaagaaggcaatattaacct 9821
Query: 736 aatcaccatgtaagcactctggatgatggattccacaaaacttggttttatggttacttc 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9820 aatcaccatgtaagcactctggatgatggattccacaaaacttggttttatggttacttc 9761
Query: 796 ttctcttagattcttaattcat 817
||||||||||||||||||||||
Sbjct: 9760 ttctcttagattcttaattcat 9739
Score = 194 bits (98), Expect = 1e-46
Identities = 98/98 (100%)
Strand = Plus / Minus
Query: 855 tttctctattaaaatgcattcgttgtgttttttaagatagtgtaacttgcttaaatttct 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9701 tttctctattaaaatgcattcgttgtgttttttaagatagtgtaacttgcttaaatttct 9642
Query: 915 tatgtgacattaacaaataaaaaagctcttttaatatt 952
||||||||||||||||||||||||||||||||||||||
Sbjct: 9641 tatgtgacattaacaaataaaaaagctcttttaatatt 9604
>emb|AX330946|AX330946 [Homo sapiens]Sequence 1455 from Patent
WO0194629.
Length = 2850
Score = 595 bits (300), Expect = e-167
Identities = 300/300 (100%)
Strand = Plus / Plus
Query: 155 agggaaccccaagagcatccaatagaagctgtgcaattatgtaaaattttcaactgtctt 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2059 agggaaccccaagagcatccaatagaagctgtgcaattatgtaaaattttcaactgtctt 2118
Query: 215 cctcaaaataaagaagtatggtaatctttacctgtatacagtgcagagccttctcagaag 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2119 cctcaaaataaagaagtatggtaatctttacctgtatacagtgcagagccttctcagaag 2178
Query: 275 cacagaatatttttatatttcctttatgtgaatttttaagctgcaaatctgatggcctta 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2179 cacagaatatttttatatttcctttatgtgaatttttaagctgcaaatctgatggcctta 2238
Query: 335 atttcctttttgacactgaaagttttgtaaaagaaatcatgtccatacactttgttgcaa 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2239 atttcctttttgacactgaaagttttgtaaaagaaatcatgtccatacactttgttgcaa 2298
Query: 395 gatgtgaattattgacactgaacttaataactgtgtactgttcggaaggggttcctcaaa 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2299 gatgtgaattattgacactgaacttaataactgtgtactgttcggaaggggttcctcaaa 2358
Score = 549 bits (277), Expect = e-153
Identities = 307/322 (95%)
Strand = Plus / Plus
Query: 496 aagttcttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaaga 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2400 aagttcttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaaga 2459
Query: 556 ttgccccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgt 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2460 ttgccccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgt 2519
Query: 616 gagggaggggaaaagcatttttcaatatattgaacttttgtactgaannnnnnngtaata 675
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2520 gagggaggggaaaagcatttttcaatatattgaacttttgtactgaatttttttgtaata 2579
Query: 676 agcaatcaaggttataannnnnnnnaaaatagaaattttgtaagaaggcaatattaacct 735
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2580 agcaatcaaggttataattttttttaaaatagaaattttgtaagaaggcaatattaacct 2639
Query: 736 aatcaccatgtaagcactctggatgatggattccacaaaacttggttttatggttacttc 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2640 aatcaccatgtaagcactctggatgatggattccacaaaacttggttttatggttacttc 2699
Query: 796 ttctcttagattcttaattcat 817
||||||||||||||||||||||
Sbjct: 2700 ttctcttagattcttaattcat 2721
Score = 182 bits (92), Expect = 5e-43
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 855 tttctctattaaaatgcattcgttgtgttttttaagatagtgtaacttgcttaaatttct 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2759 tttctctattaaaatgcattcgttgtgttttttaagatagtgtaacttgcttaaatttct 2818
Query: 915 tatgtgacattaacaaataaaaaagctctttt 946
||||||||||||||||||||||||||||||||
Sbjct: 2819 tatgtgacattaacaaataaaaaagctctttt 2850
>emb|M34458|HSLAMBA [Homo sapiens]Human lamin B mRNA, complete cds.
Length = 2850
Score = 595 bits (300), Expect = e-167
Identities = 300/300 (100%)
Strand = Plus / Plus
Query: 155 agggaaccccaagagcatccaatagaagctgtgcaattatgtaaaattttcaactgtctt 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2059 agggaaccccaagagcatccaatagaagctgtgcaattatgtaaaattttcaactgtctt 2118
Query: 215 cctcaaaataaagaagtatggtaatctttacctgtatacagtgcagagccttctcagaag 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2119 cctcaaaataaagaagtatggtaatctttacctgtatacagtgcagagccttctcagaag 2178
Query: 275 cacagaatatttttatatttcctttatgtgaatttttaagctgcaaatctgatggcctta 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2179 cacagaatatttttatatttcctttatgtgaatttttaagctgcaaatctgatggcctta 2238
Query: 335 atttcctttttgacactgaaagttttgtaaaagaaatcatgtccatacactttgttgcaa 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2239 atttcctttttgacactgaaagttttgtaaaagaaatcatgtccatacactttgttgcaa 2298
Query: 395 gatgtgaattattgacactgaacttaataactgtgtactgttcggaaggggttcctcaaa 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2299 gatgtgaattattgacactgaacttaataactgtgtactgttcggaaggggttcctcaaa 2358
Score = 549 bits (277), Expect = e-153
Identities = 307/322 (95%)
Strand = Plus / Plus
Query: 496 aagttcttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaaga 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2400 aagttcttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaaga 2459
Query: 556 ttgccccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgt 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2460 ttgccccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgt 2519
Query: 616 gagggaggggaaaagcatttttcaatatattgaacttttgtactgaannnnnnngtaata 675
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2520 gagggaggggaaaagcatttttcaatatattgaacttttgtactgaatttttttgtaata 2579
Query: 676 agcaatcaaggttataannnnnnnnaaaatagaaattttgtaagaaggcaatattaacct 735
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2580 agcaatcaaggttataattttttttaaaatagaaattttgtaagaaggcaatattaacct 2639
Query: 736 aatcaccatgtaagcactctggatgatggattccacaaaacttggttttatggttacttc 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2640 aatcaccatgtaagcactctggatgatggattccacaaaacttggttttatggttacttc 2699
Query: 796 ttctcttagattcttaattcat 817
||||||||||||||||||||||
Sbjct: 2700 ttctcttagattcttaattcat 2721
Score = 182 bits (92), Expect = 5e-43
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 855 tttctctattaaaatgcattcgttgtgttttttaagatagtgtaacttgcttaaatttct 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2759 tttctctattaaaatgcattcgttgtgttttttaagatagtgtaacttgcttaaatttct 2818
Query: 915 tatgtgacattaacaaataaaaaagctctttt 946
||||||||||||||||||||||||||||||||
Sbjct: 2819 tatgtgacattaacaaataaaaaagctctttt 2850
>emb|BC012295|BC012295 [Homo sapiens]Homo sapiens, Similar to lamin
B1, clone MGC:5168 IMAGE:3445475, mRNA, complete cds.
Length = 2813
Score = 587 bits (296), Expect = e-164
Identities = 299/300 (99%)
Strand = Plus / Plus
Query: 155 agggaaccccaagagcatccaatagaagctgtgcaattatgtaaaattttcaactgtctt 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2002 agggaaccccaagagcatccaatagaagctgtgcaattatgtaaaattttcaactgtctt 2061
Query: 215 cctcaaaataaagaagtatggtaatctttacctgtatacagtgcagagccttctcagaag 274
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2062 cctcaaaataaagaagtatggtaatccttacctgtatacagtgcagagccttctcagaag 2121
Query: 275 cacagaatatttttatatttcctttatgtgaatttttaagctgcaaatctgatggcctta 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2122 cacagaatatttttatatttcctttatgtgaatttttaagctgcaaatctgatggcctta 2181
Query: 335 atttcctttttgacactgaaagttttgtaaaagaaatcatgtccatacactttgttgcaa 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2182 atttcctttttgacactgaaagttttgtaaaagaaatcatgtccatacactttgttgcaa 2241
Query: 395 gatgtgaattattgacactgaacttaataactgtgtactgttcggaaggggttcctcaaa 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2242 gatgtgaattattgacactgaacttaataactgtgtactgttcggaaggggttcctcaaa 2301
Score = 549 bits (277), Expect = e-153
Identities = 307/322 (95%)
Strand = Plus / Plus
Query: 496 aagttcttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaaga 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2343 aagttcttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaaga 2402
Query: 556 ttgccccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgt 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2403 ttgccccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgt 2462
Query: 616 gagggaggggaaaagcatttttcaatatattgaacttttgtactgaannnnnnngtaata 675
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2463 gagggaggggaaaagcatttttcaatatattgaacttttgtactgaatttttttgtaata 2522
Query: 676 agcaatcaaggttataannnnnnnnaaaatagaaattttgtaagaaggcaatattaacct 735
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2523 agcaatcaaggttataattttttttaaaatagaaattttgtaagaaggcaatattaacct 2582
Query: 736 aatcaccatgtaagcactctggatgatggattccacaaaacttggttttatggttacttc 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2583 aatcaccatgtaagcactctggatgatggattccacaaaacttggttttatggttacttc 2642
Query: 796 ttctcttagattcttaattcat 817
||||||||||||||||||||||
Sbjct: 2643 ttctcttagattcttaattcat 2664
Score = 192 bits (97), Expect = 5e-46
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 855 tttctctattaaaatgcattcgttgtgttttttaagatagtgtaacttgcttaaatttct 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2702 tttctctattaaaatgcattcgttgtgttttttaagatagtgtaacttgcttaaatttct 2761
Query: 915 tatgtgacattaacaaataaaaaagctcttttaatat 951
|||||||||||||||||||||||||||||||||||||
Sbjct: 2762 tatgtgacattaacaaataaaaaagctcttttaatat 2798
>emb|AX281804|AX281804 [Homo sapiens]Sequence 213 from Patent
WO0177389.
Length = 3023
Score = 571 bits (288), Expect = e-160
Identities = 297/300 (99%)
Strand = Plus / Plus
Query: 155 agggaaccccaagagcatccaatagaagctgtgcaattatgtaaaattttcaactgtctt 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2060 agggaaccccaagagcatccaatagaagctgtgcaattatgtaaaattttcaactgtctt 2119
Query: 215 cctcaaaataaagaagtatggtaatctttacctgtatacagtgcagagccttctcagaag 274
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2120 cctcaaaataaagaaatatggtaatccttacctgtatacagtgcagagccttctcagaag 2179
Query: 275 cacagaatatttttatatttcctttatgtgaatttttaagctgcaaatctgatggcctta 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2180 cacagaatatttttatatttcctttatgtgaatttttaagctgcaaatctgatggcctta 2239
Query: 335 atttcctttttgacactgaaagttttgtaaaagaaatcatgtccatacactttgttgcaa 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2240 atttcctttttgacactgaaagttttgtaaaagaaatcatgtccatacactttgttgcaa 2299
Query: 395 gatgtgaattattgacactgaacttaataactgtgtactgttcggaaggggttcctcaaa 454
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2300 gatgtgaattattgacactgaacttaataactgtgtactgtttggaaggggttcctcaaa 2359
Score = 549 bits (277), Expect = e-153
Identities = 307/322 (95%)
Strand = Plus / Plus
Query: 496 aagttcttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaaga 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 aagttcttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaaga 2460
Query: 556 ttgccccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgt 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 ttgccccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgt 2520
Query: 616 gagggaggggaaaagcatttttcaatatattgaacttttgtactgaannnnnnngtaata 675
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2521 gagggaggggaaaagcatttttcaatatattgaacttttgtactgaatttttttgtaata 2580
Query: 676 agcaatcaaggttataannnnnnnnaaaatagaaattttgtaagaaggcaatattaacct 735
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2581 agcaatcaaggttataattttttttaaaatagaaattttgtaagaaggcaatattaacct 2640
Query: 736 aatcaccatgtaagcactctggatgatggattccacaaaacttggttttatggttacttc 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 aatcaccatgtaagcactctggatgatggattccacaaaacttggttttatggttacttc 2700
Query: 796 ttctcttagattcttaattcat 817
||||||||||||||||||||||
Sbjct: 2701 ttctcttagattcttaattcat 2722
Score = 194 bits (98), Expect = 1e-46
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 855 tttctctattaaaatgcattcgttgtgttttttaagatagtgtaacttgcttaaatttct 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2760 tttctctattaaaatgcattcgttgtgttttttaagatagtgtaacttgcttaaatttct 2819
Query: 915 tatgtgacattaacaaataaaaaagctcttttaatatt 952
||||||||||||||||||||||||||||||||||||||
Sbjct: 2820 tatgtgacattaacaaataaaaaagctcttttaatatt 2857
>emb|AK056553|AK056553 [Homo sapiens]Homo sapiens cDNA FLJ31991 fis,
clone NT2RP7009097.
Length = 2795
Score = 571 bits (288), Expect = e-160
Identities = 297/300 (99%)
Strand = Plus / Plus
Query: 155 agggaaccccaagagcatccaatagaagctgtgcaattatgtaaaattttcaactgtctt 214
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2226 agggaaccccaagagcatccaatagaagctgtgcaattatgtaaaattttcaactgtctc 2285
Query: 215 cctcaaaataaagaagtatggtaatctttacctgtatacagtgcagagccttctcagaag 274
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2286 cctcaaaataaagaagtatggtaatccttacctgtatacagtgcagagccttctcagaag 2345
Query: 275 cacagaatatttttatatttcctttatgtgaatttttaagctgcaaatctgatggcctta 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2346 cacagaatatttttatatttcctttatgtgaatttttaagctgcaaatctgatggcctta 2405
Query: 335 atttcctttttgacactgaaagttttgtaaaagaaatcatgtccatacactttgttgcaa 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2406 atttcctttttgacactgaaagttttgtaaaagaaatcatgtccatacactttgttgcaa 2465
Query: 395 gatgtgaattattgacactgaacttaataactgtgtactgttcggaaggggttcctcaaa 454
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2466 gatgtgaattattgacactgaacttaataactgtgtactgtttggaaggggttcctcaaa 2525
Score = 182 bits (92), Expect = 5e-43
Identities = 98/100 (98%)
Strand = Plus / Plus
Query: 496 aagttcttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaaga 555
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2567 aagttcttatgaggaggggagggtaaataaaccgctgtgcgtcttggtgtaatttgaaga 2626
Query: 556 ttgccccatctagactagcaatctcttcattattctctgc 595
||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2627 ttgccccatctagactagcaatctcttcattattccctgc 2666
>emb|AX366367|AX366367 [Homo sapiens]Sequence 134 from Patent
WO0206317.
Length = 421
Score = 531 bits (268), Expect = e-148
Identities = 301/317 (94%)
Strand = Plus / Minus
Query: 501 cttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaagattgcc 560
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttatgagaaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaagattgcc 362
Query: 561 ccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgtgaggg 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgtgaggg 302
Query: 621 aggggaaaagcatttttcaatatattgaacttttgtactgaannnnnnngtaataagcaa 680
|||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 301 aggggaaaagcatttttcaatatattgaacttttgtactgaatttttttgtaataagcaa 242
Query: 681 tcaaggttataannnnnnnnaaaatagaaattttgtaagaaggcaatattaacctaatca 740
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcaaggttataattttttttaaaatagaaattttgtaagaaggcaatattaacctaatca 182
Query: 741 ccatgtaagcactctggatgatggattccacaaaacttggttttatggttacttcttctc 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccatgtaagcactctggatgatggattccacaaaacttggttttatggttacttcttctc 122
Query: 801 ttagattcttaattcat 817
|||||||||||||||||
Sbjct: 121 ttagattcttaattcat 105
Score = 129 bits (65), Expect = 7e-27
Identities = 66/67 (98%)
Strand = Plus / Minus
Query: 855 tttctctattaaaatgcattcgttgtgttttttaagatagtgtaacttgcttaaatttct 914
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 67 tttctctattaaaatgcattcgttgtgttttttaagatagygtaacttgcttaaatttct 8
Query: 915 tatgtga 921
|||||||
Sbjct: 7 tatgtga 1
>emb|AX261176|AX261176 [Homo sapiens]Sequence 827 from Patent
WO0173027.
Length = 349
Score = 337 bits (170), Expect = 1e-89
Identities = 188/197 (95%)
Strand = Plus / Minus
Query: 496 aagttcttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaaga 555
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 204 aagttcttatgaggaggggagggtaaataanccactgtgcgtcttggtgtaatttgaaga 145
Query: 556 ttgccccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgt 615
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ntgccccatctagactagcaatctcttcattattctctgctatatataaaacggtgctgt 85
Query: 616 gagggaggggaaaagcatttttcaatatattgaacttttgtactgaannnnnnngtaata 675
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 84 gagggaggggaaaagcatttttcaatatattgaacttttgtactgaatttttttgtaata 25
Query: 676 agcaatcaaggttataa 692
|||||||||||||||||
Sbjct: 24 agcaatcaaggttataa 8
Score = 141 bits (71), Expect = 2e-30
Identities = 97/104 (93%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 353 aaagttttgtaaaagaaatcatgtccatacactttgttgcaagatgtgaattattga-ca 411
||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||
Sbjct: 349 aaagttttgaaaaagaaatcatgtccatacnctttgntgcaagatgtgaattattgacca 290
Query: 412 c-tgaacttaataactgtgtactgttcggaaggggttcctcaaa 454
| ||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 289 cntgaacttaataactgtgnactgtttggaaggggttcctcaaa 246
>emb|AX261631|AX261631 [Homo sapiens]Sequence 1282 from Patent
WO0173027.
Length = 432
Score = 258 bits (130), Expect = 1e-65
Identities = 182/200 (91%), Gaps = 3/200 (1%)
Strand = Plus / Minus
Query: 496 aagttcttatgaggaggggagggtaaataaaccactgtgcgtcttggtgtaatttgaaga 555
||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || |
Sbjct: 208 aagttcttangaggaggggagggtngataaaccactgtgcgtcttggtgtaatttnaana 149
Query: 556 tt-gccccatctag-actagcaa-tctcttcattattctctgctatatataaaacggtgc 612
|| ||||||||||| || ||||| |||||||||||||||| || ||||||||||||||||
Sbjct: 148 ttngccccatctaggacnagcaaatctcttcattattctcngcnatatataaaacggtgc 89
Query: 613 tgtgagggaggggaaaagcatttttcaatatattgaacttttgtactgaannnnnnngta 672
|||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 88 tgtgagggaggggaaaagcatttttcaatatattgaacttttgtactgaatttttttgta 29
Query: 673 ataagcaatcaaggttataa 692
||||||||||||||||||||
Sbjct: 28 ataagcaatcaaggttataa 9
Score = 208 bits (105), Expect = 9e-51
Identities = 146/163 (89%)
Strand = Plus / Minus
Query: 292 tttcctttatgtgaatttttaagctgcaaatctgatggccttaatttcctttttgacact 351
||||||||| | ||||||||||| ||| |||| | |||||| ||||||||||| ||||
Sbjct: 412 tttcctttangngaatttttaagntgctgatctaanggccttgatttcctttttngcact 353
Query: 352 gaaagttttgtaaaagaaatcatgtccatacactttgttgcaagatgtgaattattgaca 411
||||||| ||||||||||||||||||| ||| ||||| |||||||||||||||| ||||
Sbjct: 352 naaagtttngtaaaagaaatcatgtccaaacantttgtngcaagatgtgaattatngaca 293
Query: 412 ctgaacttaataactgtgtactgttcggaaggggttcctcaaa 454
||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 292 ctgaacttaataactgtgtactgtttggaaggggttcctcaaa 250
>emb|D50080|MMLAMIN11 [Mus musculus]Mouse DNA for lamin B1, exon 11,
complete cds.
Length = 1078
Score = 256 bits (129), Expect = 4e-65
Identities = 161/171 (94%), Gaps = 3/171 (1%)
Strand = Plus / Plus
Query: 245 cctgtatacagtgcagagccttctcagaagcacagaatatttttatatttcctttatgtg 304
|||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 191 cctgtatacagtgcagagccttctcagaagcacatgatatttttgtatttcctttatgtg 250
Query: 305 aatttttaagctgcaaatctgatggccttaatttcctttttgacactgaaagttttgtaa 364
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aatttttaagctgcgaatctgatggccttaatttcctttttgacactgaaagttttgtaa 310
Query: 365 aagaaatcatgtccatacactttgttgcaagatgtgaattattgacactga 415
|||||||| | ||||||||| |||| |||||||||||||||||||||||
Sbjct: 311 aagaaatcctatccatacac---gttgtaagatgtgaattattgacactga 358
Score = 75.8 bits (38), Expect = 9e-11
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 883 tttttaagatagtgtaacttgcttaaatttcttatgtgacattaacaaataaaa 936
|||||||||||||||||| |||||| ||||||||| |||||||||||||||||
Sbjct: 847 tttttaagatagtgtaacatgcttacatttcttatccgacattaacaaataaaa 900
Score = 71.9 bits (36), Expect = 1e-09
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 713 ttgtaagaaggcaatattaacctaatcaccatgtaagcactctggatg 760
|||||||||||||||||||| ||| |||||||||| ||||||||||||
Sbjct: 681 ttgtaagaaggcaatattaatctagtcaccatgtacgcactctggatg 728
Score = 60.0 bits (30), Expect = 5e-06
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 155 agggaaccccaagagcatccaatagaagctgtgcaattatgt 196
||||| |||||||||||||||||| ||||||||| |||||||
Sbjct: 101 agggagccccaagagcatccaataaaagctgtgccattatgt 142
>emb|X16705|MMLAMINB [Mus musculus]Mouse mRNA for lamin B
Length = 2797
Score = 242 bits (122), Expect = 7e-61
Identities = 161/172 (93%), Gaps = 4/172 (2%)
Strand = Plus / Plus
Query: 245 cctgtatacagtgcagagccttctcagaagcacagaatatttttatatttcctttatgtg 304
|||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 2068 cctgtatacagtgcagagccttctcagaagcacatgatatttttgtatttcctttatgtg 2127
Query: 305 aatttttaagctgcaaatctgatggccttaatttcctttttgacactgaaagttttgt-a 363
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2128 aatttttaagctgcgaatctgatggccttaatttcctttttgacactgaaagttttgtca 2187
Query: 364 aaagaaatcatgtccatacactttgttgcaagatgtgaattattgacactga 415
||||||||| | ||||||||| |||| |||||||||||||||||||||||
Sbjct: 2188 aaagaaatcctatccatacac---gttgtaagatgtgaattattgacactga 2236
Score = 60.0 bits (30), Expect = 5e-06
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 883 tttttaagatagtgtaacttgcttaaatttcttatgtgacattaacaaataaaa 936
|||||||||||||||| | |||||| ||||||||| |||||||||||||||||
Sbjct: 2730 tttttaagatagtgta-catgcttacatttcttatccgacattaacaaataaaa 2782
Score = 44.1 bits (22), Expect = 0.31
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 155 agggaaccccaagagcatccaatagaagctgtgcaattatgt 196
||||| |||||||||||| |||| ||||||||| |||||||
Sbjct: 1978 agggagccccaagagcatggaataaaagctgtgccattatgt 2019
Score = 42.1 bits (21), Expect = 1.2
Identities = 43/49 (87%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 713 ttgtaagaaggcaatattaacctaatcacc-atgtaagcactctggatg 760
||||||||| | |||||||| ||| ||||| ||||| ||||||||||||
Sbjct: 2564 ttgtaagaacggaatattaatctagtcacccatgtacgcactctggatg 2612
>emb|M35153|MMLAMB [Mus musculus]Mus musculus lamin B mRNA, complete
cds.
Length = 2789
Score = 242 bits (122), Expect = 7e-61
Identities = 161/172 (93%), Gaps = 4/172 (2%)
Strand = Plus / Plus
Query: 245 cctgtatacagtgcagagccttctcagaagcacagaatatttttatatttcctttatgtg 304
|||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 2066 cctgtatacagtgcagagccttctcagaagcacatgatatttttgtatttcctttatgtg 2125
Query: 305 aatttttaagctgcaaatctgatggccttaatttcctttttgacactgaaagttttgt-a 363
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2126 aatttttaagctgcgaatctgatggccttaatttcctttttgacactgaaagttttgtca 2185
Query: 364 aaagaaatcatgtccatacactttgttgcaagatgtgaattattgacactga 415
||||||||| | ||||||||| |||| |||||||||||||||||||||||
Sbjct: 2186 aaagaaatcctatccatacac---gttgtaagatgtgaattattgacactga 2234
Score = 60.0 bits (30), Expect = 5e-06
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 883 tttttaagatagtgtaacttgcttaaatttcttatgtgacattaacaaataaaa 936
|||||||||||||||| | |||||| ||||||||| |||||||||||||||||
Sbjct: 2722 tttttaagatagtgta-catgcttacatttcttatccgacattaacaaataaaa 2774
Score = 44.1 bits (22), Expect = 0.31
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 155 agggaaccccaagagcatccaatagaagctgtgcaattatgt 196
||||| |||||||||||| |||| ||||||||| |||||||
Sbjct: 1976 agggagccccaagagcatggaataaaagctgtgccattatgt 2017
Score = 42.1 bits (21), Expect = 1.2
Identities = 43/49 (87%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 713 ttgtaagaaggcaatattaacctaatcacc-atgtaagcactctggatg 760
||||||||| | |||||||| ||| ||||| ||||| ||||||||||||
Sbjct: 2556 ttgtaagaacggaatattaatctagtcacccatgtacgcactctggatg 2604
>emb|U72353|RNU72353 [Rattus norvegicus]Rattus norvegicus lamin B1
mRNA, complete cds.
Length = 2154
Score = 67.9 bits (34), Expect = 2e-08
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 155 agggaaccccaagagcatccaatagaagctgtgcaattatgt 196
|||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 2047 agggaaccccaagagcatccaataaaagctgtgccattatgt 2088
>emb|AE003631|AE003631 [Drosophila melanogaster]Drosophila melanogaster
genomic scaffold 142000013386055 section 24 of 63,
complete sequence.
Length = 261383
Score = 46.1 bits (23), Expect = 0.078
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 862 attaaaatgcattcgttgtgttt 884
|||||||||||||||||||||||
Sbjct: 20771 attaaaatgcattcgttgtgttt 20793
>emb|AC092226|AC092226 [Drosophila melanogaster]Drosophila melanogaster,
chromosome 2L, region 32A-32B, BAC clone BACR20O15,
complete sequence.
Length = 169210
Score = 46.1 bits (23), Expect = 0.078
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 862 attaaaatgcattcgttgtgttt 884
|||||||||||||||||||||||
Sbjct: 111757 attaaaatgcattcgttgtgttt 111779
>emb|AC005117|AC005117 [Drosophila melanogaster]Drosophila melanogaster,
chromosome 2L, region 32D1-32D2, P1 clone DS04313,
complete sequence.
Length = 69019
Score = 46.1 bits (23), Expect = 0.078
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 862 attaaaatgcattcgttgtgttt 884
|||||||||||||||||||||||
Sbjct: 47327 attaaaatgcattcgttgtgttt 47349
>emb|AE003721|AE003721 [Drosophila melanogaster]Drosophila melanogaster
genomic scaffold 142000013386035 section 46 of 105,
complete sequence.
Length = 224896
Score = 44.1 bits (22), Expect = 0.31
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 270 agaagcacagaatatttttatatttccttt 299
|||||||||||| | |||||||||||||||
Sbjct: 83397 agaagcacagaaaaattttatatttccttt 83368
>emb|AC009462|AC009462 [Drosophila melanogaster]Drosophila melanogaster,
chromosome 3R, region 90E-90E, BAC clone BACR27G04,
complete sequence.
Length = 151610
Score = 44.1 bits (22), Expect = 0.31
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 270 agaagcacagaatatttttatatttccttt 299
|||||||||||| | |||||||||||||||
Sbjct: 142972 agaagcacagaaaaattttatatttccttt 142943
>emb|AC009394|AC009394 [Drosophila melanogaster]Drosophila melanogaster,
chromosome 3R, region 90E-90F, BAC clone BACR03J17,
complete sequence.
Length = 199044
Score = 44.1 bits (22), Expect = 0.31
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 270 agaagcacagaatatttttatatttccttt 299
|||||||||||| | |||||||||||||||
Sbjct: 62902 agaagcacagaaaaattttatatttccttt 62873
>emb|AL035444|HS43H13 [Homo sapiens]Human DNA sequence from clone
43H13 on chromosome Xq21.33-22.3 Contains EST, CA
repeat(DXS8096) and GSS.
Length = 27479
Score = 44.1 bits (22), Expect = 0.31
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 632 atttttcaatatattgaacttttgta 657
||||||||| ||||||||||||||||
Sbjct: 1648 atttttcaaaatattgaacttttgta 1673
>emb|AL512640|AL512640 [Homo sapiens]Human DNA sequence from clone
RP11-219K22 on chromosome 10
Length = 96322
Score = 44.1 bits (22), Expect = 0.31
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 312 aagctgcaaatctgatggcctt 333
||||||||||||||||||||||
Sbjct: 19430 aagctgcaaatctgatggcctt 19451
>emb|AP003193|AP003193 [Clostridium perfringens]Clostridium perfringens
DNA, complete genome, section 9/10.
Length = 303250
Score = 42.1 bits (21), Expect = 1.2
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 626 aaaagcatttttcaatatatt 646
|||||||||||||||||||||
Sbjct: 272424 aaaagcatttttcaatatatt 272444
>emb|X64726|PSGDCHAA [Pisum sativum]P.sativum gdcH gene for H-protein
of glycine decarboxylase complex
Length = 1808
Score = 42.1 bits (21), Expect = 1.2
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 631 catttttcaatatattgaact 651
|||||||||||||||||||||
Sbjct: 1343 catttttcaatatattgaact 1363
>emb|J05164|PSGDC [Pisum sativum]Pea (P.sativum) H-protein of
glycine decarboxylase mRNA, complete cds.
Length = 679
Score = 42.1 bits (21), Expect = 1.2
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 631 catttttcaatatattgaact 651
|||||||||||||||||||||
Sbjct: 560 catttttcaatatattgaact 580
>emb|AY064061|AY064061 [Arabidopsis thaliana]Arabidopsis thaliana
putative Eukaryotic translation initiation factor 5
(At1g36730) mRNA, complete cds.
Length = 2213
Score = 42.1 bits (21), Expect = 1.2
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 777 ttggttttatggttacttcttctcttaga 805
||||||||||||||||| ||| |||||||
Sbjct: 1927 ttggttttatggttactacttttcttaga 1955
>emb|AY056208|AY056208 [Arabidopsis thaliana]Arabidopsis thaliana
putative eukaryotic translation initiation factor 5
(At1g36730) mRNA, complete cds.
Length = 2053
Score = 42.1 bits (21), Expect = 1.2
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 777 ttggttttatggttacttcttctcttaga 805
||||||||||||||||| ||| |||||||
Sbjct: 1927 ttggttttatggttactacttttcttaga 1955
>emb|AC025782|AC025782 [Arabidopsis thaliana]Arabidopsis thaliana
chromosome 1 BAC T15P17 genomic sequence, complete
sequence.
Length = 97899
Score = 42.1 bits (21), Expect = 1.2
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 777 ttggttttatggttacttcttctcttaga 805
||||||||||||||||| ||| |||||||
Sbjct: 73699 ttggttttatggttactacttttcttaga 73671
>emb|X53656|PSHPMIT [Pisum sativum]P.sativum mRNA for H-protein of
leaf mitochondria.
Length = 844
Score = 42.1 bits (21), Expect = 1.2
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 631 catttttcaatatattgaact 651
|||||||||||||||||||||
Sbjct: 597 catttttcaatatattgaact 617
>emb|AL670220|AL670220 [Mus musculus]Mouse DNA sequence from clone
RP23-260P9 on chromosome X
Length = 201726
Score = 42.1 bits (21), Expect = 1.2
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 130 atttttccttctgttttcctc 150
|||||||||||||||||||||
Sbjct: 146404 atttttccttctgttttcctc 146424
>emb|AD000671|HSAD671 [Homo sapiens]Homo sapiens DNA from chromosome
19-cosmid f24109 containing HRX2, genomic sequence.
Length = 46251
Score = 42.1 bits (21), Expect = 1.2
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 502 ttatgaggaggggagggtaaa 522
|||||||||||||||||||||
Sbjct: 2753 ttatgaggaggggagggtaaa 2773
>emb|AC002314|HSAC2314 [Homo sapiens]Human DNA from chromosome 19 cosmid
R28052, genomic sequence, complete sequence.
Length = 40379
Score = 42.1 bits (21), Expect = 1.2
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 502 ttatgaggaggggagggtaaa 522
|||||||||||||||||||||
Sbjct: 33581 ttatgaggaggggagggtaaa 33601
>emb|AC103890|AC103890 [Homo sapiens]16q24.3 clone, complete sequence.
Length = 129848
Score = 42.1 bits (21), Expect = 1.2
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 348 cactgaaagttttgtaaaaga 368
|||||||||||||||||||||
Sbjct: 25384 cactgaaagttttgtaaaaga 25364
>emb|AC025237|AC025237 [Homo sapiens]Homo sapiens BAC clone RP11-414D7
from 4, complete sequence.
Length = 61502
Score = 42.1 bits (21), Expect = 1.2
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 278 agaatatttttatatttcctt 298
|||||||||||||||||||||
Sbjct: 3301 agaatatttttatatttcctt 3281
>emb|Z12296|EFSPREG [Enterococcus faecalis]E.faecalis sprE gene for
serine proteinase homologue
Length = 1085
Score = 40.1 bits (20), Expect = 4.8
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 880 tgttttttaagatagtgtaa 899
||||||||||||||||||||
Sbjct: 1001 tgttttttaagatagtgtaa 1020
>emb|AP003186|AP003186 [Clostridium perfringens]Clostridium perfringens
DNA, complete genome, section 2/10.
Length = 302300
Score = 40.1 bits (20), Expect = 4.8
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 351 tgaaagttttgtaaaagaaa 370
||||||||||||||||||||
Sbjct: 287916 tgaaagttttgtaaaagaaa 287935
>emb|AE007616|AE007616 [Clostridium acetobutylicum]Clostridium
acetobutylicum ATCC824 section 104 of 356 of the
complete genome.
Length = 9774
Score = 40.1 bits (20), Expect = 4.8
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 283 atttttatatttcctttatg 302
||||||||||||||||||||
Sbjct: 749 atttttatatttcctttatg 730
>emb|AL023094|ATT4L20 [Arabidopsis thaliana]Arabidopsis thaliana DNA
chromosome 4, BAC clone T4L20 (ESSA project)
Length = 125502
Score = 40.1 bits (20), Expect = 4.8
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 357 ttttgtaaaagaaatcatgt 376
||||||||||||||||||||
Sbjct: 31910 ttttgtaaaagaaatcatgt 31891
>emb|AL161585|ATCHRIV81 [Arabidopsis thaliana]Arabidopsis thaliana DNA
chromosome 4, contig fragment No. 81
Length = 195921
Score = 40.1 bits (20), Expect = 4.8
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 357 ttttgtaaaagaaatcatgt 376
||||||||||||||||||||
Sbjct: 141599 ttttgtaaaagaaatcatgt 141580
>emb|AF069165|AF069165 [Aphidius smithi]Aphidius smithi NADH
dehydrogenase 1 gene, mitochondrial gene encoding
mitochondrial protein, partial cds.
Length = 465
Score = 40.1 bits (20), Expect = 4.8
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 111 atctatttctttagtattaatttt 134
||||||||||||| ||||||||||
Sbjct: 300 atctatttctttattattaatttt 323
>emb|AF069162|AF069162 [Aphidius nigripes]Aphidius nigripes NADH
dehydrogenase 1 gene, mitochondrial gene encoding
mitochondrial protein, partial cds.
Length = 465
Score = 40.1 bits (20), Expect = 4.8
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 111 atctatttctttagtattaatttt 134
||||||||||||| ||||||||||
Sbjct: 300 atctatttctttattattaatttt 323
>emb|AF393442|AF393442 [Sacculina carcini]Sacculina carcini
ultrabithorax (Ubx) mRNA, partial cds.
Length = 1000
Score = 40.1 bits (20), Expect = 4.8
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 324 tgatggccttaatttcctttttga 347
||||||||| ||||||||||||||
Sbjct: 185 tgatggcctgaatttcctttttga 162
>emb|Z75551|CET28H10 [Caenorhabditis elegans]Caenorhabditis elegans
cosmid T28H10
Length = 14915
Score = 40.1 bits (20), Expect = 4.8
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 330 ccttaatttcctttttgaca 349
||||||||||||||||||||
Sbjct: 3969 ccttaatttcctttttgaca 3950
>emb|AF110404|AF110404 [Bactrocera tryoni]Bactrocera tryoni
Homer-like transposable element, partial sequence.
Length = 4207
Score = 40.1 bits (20), Expect = 4.8
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 588 ttctctgctatatataaaac 607
||||||||||||||||||||
Sbjct: 46 ttctctgctatatataaaac 27
>emb|AC084674|AC084674 [Caenorhabditis briggsae]Caenorhabditis briggsae
cosmid G47I21, complete sequence.
Length = 43351
Score = 40.1 bits (20), Expect = 4.8
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 341 tttttgacactgaaagtttt 360
||||||||||||||||||||
Sbjct: 28347 tttttgacactgaaagtttt 28366
>emb|AP000926|AP000926 [Homo sapiens]Homo sapiens genomic DNA,
chromosome 11q clone:RP11-762B21.
Length = 196973
Score = 40.1 bits (20), Expect = 4.8
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 891 atagtgtaacttgcttaaat 910
||||||||||||||||||||
Sbjct: 74597 atagtgtaacttgcttaaat 74578
>emb|AC100832|AC100832 [Homo sapiens]Homo sapiens chromosome 17, clone
RP11-579O24, complete sequence.
Length = 190107
Score = 40.1 bits (20), Expect = 4.8
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 855 tttctctattaaaatgcatt 874
||||||||||||||||||||
Sbjct: 89441 tttctctattaaaatgcatt 89422
>emb|AC110614|AC110614 [Homo sapiens]Homo sapiens BAC clone RP11-453D22
from 2, complete sequence.
Length = 185018
Score = 40.1 bits (20), Expect = 4.8
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 281 atatttttatatttcctttatgtgaatt 308
|||||||||||||||||| |||| ||||
Sbjct: 184813 atatttttatatttccttcatgttaatt 184786
Database: fun-re
Posted date: Jun 27, 2002 10:31 AM
Number of letters in database: 100,770,421
Number of sequences in database: 63,509
Database: fun-up
Posted date: Jul 3, 2002 5:00 AM
Number of letters in database: 4,058,995
Number of sequences in database: 2017
Database: hum-re
Posted date: Jun 27, 2002 10:54 AM
Number of letters in database: 3,155,282,001
Number of sequences in database: 204,742
Database: hum-up
Posted date: Jul 3, 2002 5:02 AM
Number of letters in database: 265,514,580
Number of sequences in database: 14,439
Database: inv-re
Posted date: Jun 27, 2002 10:59 AM
Number of letters in database: 553,561,424
Number of sequences in database: 94,035
Database: inv-up
Posted date: Jul 3, 2002 5:02 AM
Number of letters in database: 88,967,884
Number of sequences in database: 5598
Database: mam-re
Posted date: Jun 27, 2002 10:59 AM
Number of letters in database: 55,268,207
Number of sequences in database: 39,192
Database: mam-up
Posted date: Jul 3, 2002 5:02 AM
Number of letters in database: 3,147,097
Number of sequences in database: 1421
Database: mus-re
Posted date: Jun 27, 2002 11:02 AM
Number of letters in database: 333,366,348
Number of sequences in database: 56,513
Database: mus-up
Posted date: Jul 3, 2002 5:03 AM
Number of letters in database: 110,807,992
Number of sequences in database: 2163
Database: org-re
Posted date: Jun 27, 2002 11:03 AM
Number of letters in database: 120,192,334
Number of sequences in database: 146,033
Database: org-up
Posted date: Jul 3, 2002 5:03 AM
Number of letters in database: 5,840,826
Number of sequences in database: 7160
Database: pat-re
Posted date: Jun 27, 2002 11:08 AM
Number of letters in database: 320,069,104
Number of sequences in database: 625,664
Database: phg-re
Posted date: Jun 27, 2002 11:08 AM
Number of letters in database: 6,646,325
Number of sequences in database: 2132
Database: phg-up
Posted date: Jul 3, 2002 5:03 AM
Number of letters in database: 324,481
Number of sequences in database: 36
Database: pln-re
Posted date: Jun 27, 2002 11:11 AM
Number of letters in database: 375,983,904
Number of sequences in database: 113,246
Database: pln-up
Posted date: Jul 3, 2002 5:03 AM
Number of letters in database: 21,675,906
Number of sequences in database: 10,426
Database: pro-re
Posted date: Jun 27, 2002 11:14 AM
Number of letters in database: 440,418,884
Number of sequences in database: 143,097
Database: pro-up
Posted date: Jul 3, 2002 5:04 AM
Number of letters in database: 68,873,997
Number of sequences in database: 19,996
Database: rod-re
Posted date: Jun 27, 2002 11:15 AM
Number of letters in database: 34,483,433
Number of sequences in database: 22,176
Database: rod-up
Posted date: Jul 3, 2002 5:04 AM
Number of letters in database: 2,592,227
Number of sequences in database: 2514
Database: syn-re
Posted date: Jun 27, 2002 11:16 AM
Number of letters in database: 12,617,074
Number of sequences in database: 6653
Database: syn-up
Posted date: Jul 3, 2002 5:04 AM
Number of letters in database: 2,198,287
Number of sequences in database: 8626
Database: unc-re
Posted date: Jun 27, 2002 11:16 AM
Number of letters in database: 2,029,845
Number of sequences in database: 1259
Database: unc-up
Posted date: Jul 3, 2002 5:04 AM
Number of letters in database: 5,876,523
Number of sequences in database: 10,530
Database: vrl-re
Posted date: Jun 27, 2002 11:17 AM
Number of letters in database: 136,690,696
Number of sequences in database: 154,696
Database: vrl-up
Posted date: Jul 3, 2002 5:04 AM
Number of letters in database: 5,446,551
Number of sequences in database: 5473
Database: vrt-re
Posted date: Jun 27, 2002 11:18 AM
Number of letters in database: 56,791,966
Number of sequences in database: 35,946
Database: vrt-up
Posted date: Jul 3, 2002 5:04 AM
Number of letters in database: 4,319,688
Number of sequences in database: 1035
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,175,399
Number of Sequences: 1800327
Number of extensions: 5175399
Number of successful extensions: 119143
Number of sequences better than 10.0: 78
length of query: 958
length of database: 6,293,817,000
effective HSP length: 22
effective length of query: 936
effective length of database: 6,254,209,806
effective search space: 5853940378416
effective search space used: 5853940378416
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
Thank you for using BLAST2.0